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Cluster: Rep_893_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_893_c_15 Rep_893_c_15_15 15238 16434 - GH5_18
STP Rep_893_c_15 Rep_893_c_15_16 16723 18030 + SBP_bac_1
TC Rep_893_c_15 Rep_893_c_15_17 18131 19093 + 3.A.1.1.36
TC Rep_893_c_15 Rep_893_c_15_18 19090 19935 + 3.A.1.1.23
STP Rep_893_c_15 Rep_893_c_15_19 20025 21425 - SBP_bac_1
TC Rep_893_c_15 Rep_893_c_15_20 21434 22378 - 3.A.1.1.36
TC Rep_893_c_15 Rep_893_c_15_21 22389 23306 - 3.A.1.1.7
CAZyme Rep_893_c_15 Rep_893_c_15_22 23347 25482 - GH36
Gene ID: Rep_893_c_15_15
Type: CAZyme
Location: 15238 - 16434 (-)
Gene ID: Rep_893_c_15_16
Type: STP
Location: 16723 - 18030 (+)
Gene ID: Rep_893_c_15_17
Type: TC
Location: 18131 - 19093 (+)
Gene ID: Rep_893_c_15_18
Type: TC
Location: 19090 - 19935 (+)
Gene ID: Rep_893_c_15_19
Type: STP
Location: 20025 - 21425 (-)
Gene ID: Rep_893_c_15_20
Type: TC
Location: 21434 - 22378 (-)
Gene ID: Rep_893_c_15_21
Type: TC
Location: 22389 - 23306 (-)
Gene ID: Rep_893_c_15_22
Type: CAZyme
Location: 23347 - 25482 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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