Cluster: Rep_893_CGC31
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_893
- CGC Family ID: CGCFAM_02395
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_893_c_14 | Rep_893_c_14_45 | 32159 | 33556 | + | 3.A.1.1.40 |
| TC | Rep_893_c_14 | Rep_893_c_14_46 | 33688 | 34602 | + | 3.A.1.1.4 |
| TC | Rep_893_c_14 | Rep_893_c_14_47 | 34602 | 35543 | + | 3.A.1.1.20 |
| NULL(UNKNOWN) | Rep_893_c_14 | Rep_893_c_14_48 | 35919 | 36098 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_893_c_14 | Rep_893_c_14_49 | 36272 | 39514 | - | GH111 |
Gene ID: Rep_893_c_14_45
Type: TC
Location: 32159 - 33556 (+)
Type: TC
Location: 32159 - 33556 (+)
Gene ID: Rep_893_c_14_46
Type: TC
Location: 33688 - 34602 (+)
Type: TC
Location: 33688 - 34602 (+)
Gene ID: Rep_893_c_14_47
Type: TC
Location: 34602 - 35543 (+)
Type: TC
Location: 34602 - 35543 (+)
Gene ID: Rep_893_c_14_48
Type:
Location: 35919 - 36098 (+)
Type:
Location: 35919 - 36098 (+)
Gene ID: Rep_893_c_14_49
Type: CAZyme
Location: 36272 - 39514 (-)
Type: CAZyme
Location: 36272 - 39514 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia radingae_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.