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Cluster: Rep_893_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_893_c_1 Rep_893_c_1_89 100964 103399 - 3.A.1.30.1
TC Rep_893_c_1 Rep_893_c_1_90 103396 104031 - 3.A.1.30.1
pfam Rep_893_c_1 Rep_893_c_1_91 104172 105338 - ROK
TC Rep_893_c_1 Rep_893_c_1_92 105434 106363 + 3.A.1.1.7
TC Rep_893_c_1 Rep_893_c_1_93 106368 107312 + 3.A.1.1.36
STP Rep_893_c_1 Rep_893_c_1_94 107371 108747 + SBP_bac_1
CAZyme Rep_893_c_1 Rep_893_c_1_95 108925 110481 + GH36
pfam Rep_893_c_1 Rep_893_c_1_96 110537 111022 - AHSA1
TC Rep_893_c_1 Rep_893_c_1_97 111229 112782 + 3.D.2.1.1
TC Rep_893_c_1 Rep_893_c_1_98 112795 114285 + 3.D.2.1.1
TC Rep_893_c_1 Rep_893_c_1_99 114413 115498 - 3.A.1.5.35
TC Rep_893_c_1 Rep_893_c_1_100 115495 116580 - 3.A.1.5.14
TC Rep_893_c_1 Rep_893_c_1_101 116584 117564 - 3.A.1.5.6
TC Rep_893_c_1 Rep_893_c_1_102 117561 118568 - 3.A.1.5.36
TC Rep_893_c_1 Rep_893_c_1_103 118746 120437 - 3.A.1.5.32
CAZyme Rep_893_c_1 Rep_893_c_1_104 120494 122944 - GH3
Gene ID: Rep_893_c_1_89
Type: TC
Location: 100964 - 103399 (-)
Gene ID: Rep_893_c_1_90
Type: TC
Location: 103396 - 104031 (-)
Gene ID: Rep_893_c_1_91
Type: pfam
Location: 104172 - 105338 (-)
Gene ID: Rep_893_c_1_92
Type: TC
Location: 105434 - 106363 (+)
Gene ID: Rep_893_c_1_93
Type: TC
Location: 106368 - 107312 (+)
Gene ID: Rep_893_c_1_94
Type: STP
Location: 107371 - 108747 (+)
Gene ID: Rep_893_c_1_95
Type: CAZyme
Location: 108925 - 110481 (+)
Gene ID: Rep_893_c_1_96
Type: pfam
Location: 110537 - 111022 (-)
Gene ID: Rep_893_c_1_97
Type: TC
Location: 111229 - 112782 (+)
Gene ID: Rep_893_c_1_98
Type: TC
Location: 112795 - 114285 (+)
Gene ID: Rep_893_c_1_99
Type: TC
Location: 114413 - 115498 (-)
Gene ID: Rep_893_c_1_100
Type: TC
Location: 115495 - 116580 (-)
Gene ID: Rep_893_c_1_101
Type: TC
Location: 116584 - 117564 (-)
Gene ID: Rep_893_c_1_102
Type: TC
Location: 117561 - 118568 (-)
Gene ID: Rep_893_c_1_103
Type: TC
Location: 118746 - 120437 (-)
Gene ID: Rep_893_c_1_104
Type: CAZyme
Location: 120494 - 122944 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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