dbCAN Logo

Cluster: Rep_893_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_893_c_12 Rep_893_c_12_20 22013 24583 + GH116
TC Rep_893_c_12 Rep_893_c_12_21 24598 25983 + 2.A.26.1.1
pfam Rep_893_c_12 Rep_893_c_12_22 25973 26776 - Hydrolase_3
peptidase Rep_893_c_12 Rep_893_c_12_23 26846 27661 + S33.UPW
CAZyme Rep_893_c_12 Rep_893_c_12_24 27658 28695 + GT2
CAZyme Rep_893_c_12 Rep_893_c_12_25 28692 29936 - GH13_20
TC Rep_893_c_12 Rep_893_c_12_26 29975 30910 + 2.A.69.3.1
pfam Rep_893_c_12 Rep_893_c_12_27 30916 31623 - PNP_UDP_1
TC Rep_893_c_12 Rep_893_c_12_28 31739 33265 + 2.A.22.4.3
Gene ID: Rep_893_c_12_20
Type: CAZyme
Location: 22013 - 24583 (+)
Gene ID: Rep_893_c_12_21
Type: TC
Location: 24598 - 25983 (+)
Gene ID: Rep_893_c_12_22
Type: pfam
Location: 25973 - 26776 (-)
Gene ID: Rep_893_c_12_23
Type: peptidase
Location: 26846 - 27661 (+)
Gene ID: Rep_893_c_12_24
Type: CAZyme
Location: 27658 - 28695 (+)
Gene ID: Rep_893_c_12_25
Type: CAZyme
Location: 28692 - 29936 (-)
Gene ID: Rep_893_c_12_26
Type: TC
Location: 29975 - 30910 (+)
Gene ID: Rep_893_c_12_27
Type: pfam
Location: 30916 - 31623 (-)
Gene ID: Rep_893_c_12_28
Type: TC
Location: 31739 - 33265 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List