Cluster: Rep_893_CGC26
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_893
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_893_c_10 | Rep_893_c_10_22 | 30595 | 31809 | + | 3.A.1.136.1 |
| TC | Rep_893_c_10 | Rep_893_c_10_23 | 31809 | 32495 | + | 3.A.1.122.16 |
| pfam | Rep_893_c_10 | Rep_893_c_10_24 | 32605 | 33882 | - | Adenylsucc_synt |
| TC | Rep_893_c_10 | Rep_893_c_10_25 | 34152 | 35522 | - | 2.A.2.3.3 |
| CAZyme | Rep_893_c_10 | Rep_893_c_10_26 | 35519 | 37045 | - | GH51_1 |
Gene ID: Rep_893_c_10_22
Type: TC
Location: 30595 - 31809 (+)
Type: TC
Location: 30595 - 31809 (+)
Gene ID: Rep_893_c_10_23
Type: TC
Location: 31809 - 32495 (+)
Type: TC
Location: 31809 - 32495 (+)
Gene ID: Rep_893_c_10_24
Type: pfam
Location: 32605 - 33882 (-)
Type: pfam
Location: 32605 - 33882 (-)
Gene ID: Rep_893_c_10_25
Type: TC
Location: 34152 - 35522 (-)
Type: TC
Location: 34152 - 35522 (-)
Gene ID: Rep_893_c_10_26
Type: CAZyme
Location: 35519 - 37045 (-)
Type: CAZyme
Location: 35519 - 37045 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia radingae_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.