Cluster: Rep_893_CGC23
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_893
- CGC Family ID: CGCFAM_05598
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_893_c_9 | Rep_893_c_9_9 | 7103 | 8980 | - | GH183 |
| TC | Rep_893_c_9 | Rep_893_c_9_10 | 9045 | 9959 | - | 3.A.1.1.18 |
| TC | Rep_893_c_9 | Rep_893_c_9_11 | 9962 | 10870 | - | 3.A.1.1.11 |
| STP | Rep_893_c_9 | Rep_893_c_9_12 | 10918 | 12312 | - | SBP_bac_1 |
| CAZyme | Rep_893_c_9 | Rep_893_c_9_13 | 12537 | 13664 | + | GH172 |
Gene ID: Rep_893_c_9_9
Type: CAZyme
Location: 7103 - 8980 (-)
Type: CAZyme
Location: 7103 - 8980 (-)
Gene ID: Rep_893_c_9_10
Type: TC
Location: 9045 - 9959 (-)
Type: TC
Location: 9045 - 9959 (-)
Gene ID: Rep_893_c_9_11
Type: TC
Location: 9962 - 10870 (-)
Type: TC
Location: 9962 - 10870 (-)
Gene ID: Rep_893_c_9_12
Type: STP
Location: 10918 - 12312 (-)
Type: STP
Location: 10918 - 12312 (-)
Gene ID: Rep_893_c_9_13
Type: CAZyme
Location: 12537 - 13664 (+)
Type: CAZyme
Location: 12537 - 13664 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia radingae_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.