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Cluster: Rep_893_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_893_c_8 Rep_893_c_8_82 95799 96212 + 1.A.22.1.9
NULL(UNKNOWN) Rep_893_c_8 Rep_893_c_8_83 96252 96461 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_893_c_8 Rep_893_c_8_84 96465 100799 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_893_c_8 Rep_893_c_8_85 101098 104115 - GH2
TC Rep_893_c_8 Rep_893_c_8_86 104112 104921 - 3.A.1.1.4
TC Rep_893_c_8 Rep_893_c_8_87 104914 105852 - 3.A.1.1.4
TC Rep_893_c_8 Rep_893_c_8_88 105986 107296 - 3.A.1.1.4
CAZyme Rep_893_c_8 Rep_893_c_8_89 107719 111258 + GH30_5
Gene ID: Rep_893_c_8_82
Type: TC
Location: 95799 - 96212 (+)
Gene ID: Rep_893_c_8_83
Type:
Location: 96252 - 96461 (-)
Gene ID: Rep_893_c_8_84
Type:
Location: 96465 - 100799 (-)
Gene ID: Rep_893_c_8_85
Type: CAZyme
Location: 101098 - 104115 (-)
Gene ID: Rep_893_c_8_86
Type: TC
Location: 104112 - 104921 (-)
Gene ID: Rep_893_c_8_87
Type: TC
Location: 104914 - 105852 (-)
Gene ID: Rep_893_c_8_88
Type: TC
Location: 105986 - 107296 (-)
Gene ID: Rep_893_c_8_89
Type: CAZyme
Location: 107719 - 111258 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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