Cluster: Rep_893_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_893
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_893_c_1 | Rep_893_c_1_51 | 54398 | 56689 | + | 3.A.1.26.3 |
| TC | Rep_893_c_1 | Rep_893_c_1_52 | 56686 | 57516 | + | 3.A.1.26.3 |
| pfam | Rep_893_c_1 | Rep_893_c_1_53 | 58836 | 60293 | + | DUF4352 |
| CAZyme | Rep_893_c_1 | Rep_893_c_1_54 | 60412 | 61953 | - | CE4 |
Gene ID: Rep_893_c_1_51
Type: TC
Location: 54398 - 56689 (+)
Type: TC
Location: 54398 - 56689 (+)
Gene ID: Rep_893_c_1_52
Type: TC
Location: 56686 - 57516 (+)
Type: TC
Location: 56686 - 57516 (+)
Gene ID: Rep_893_c_1_53
Type: pfam
Location: 58836 - 60293 (+)
Type: pfam
Location: 58836 - 60293 (+)
Gene ID: Rep_893_c_1_54
Type: CAZyme
Location: 60412 - 61953 (-)
Type: CAZyme
Location: 60412 - 61953 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia radingae_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.