Cluster: Rep_893_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_893
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_893_c_6 | Rep_893_c_6_108 | 121234 | 122583 | + | 3.A.1.1.21 |
| TC | Rep_893_c_6 | Rep_893_c_6_109 | 122657 | 123562 | + | 3.A.1.1.11 |
| TC | Rep_893_c_6 | Rep_893_c_6_110 | 123564 | 124397 | + | 3.A.1.1.41 |
| CAZyme | Rep_893_c_6 | Rep_893_c_6_111 | 124394 | 126490 | + | CBM66 |
Gene ID: Rep_893_c_6_108
Type: TC
Location: 121234 - 122583 (+)
Type: TC
Location: 121234 - 122583 (+)
Gene ID: Rep_893_c_6_109
Type: TC
Location: 122657 - 123562 (+)
Type: TC
Location: 122657 - 123562 (+)
Gene ID: Rep_893_c_6_110
Type: TC
Location: 123564 - 124397 (+)
Type: TC
Location: 123564 - 124397 (+)
Gene ID: Rep_893_c_6_111
Type: CAZyme
Location: 124394 - 126490 (+)
Type: CAZyme
Location: 124394 - 126490 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia radingae_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.