Cluster: Rep_893_CGC14
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_893
- CGC Family ID: CGCFAM_07752
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_893_c_6 | Rep_893_c_6_88 | 101971 | 103062 | - | 8.A.21.2.2 |
| pfam | Rep_893_c_6 | Rep_893_c_6_89 | 103075 | 103515 | - | NfeD |
| TC | Rep_893_c_6 | Rep_893_c_6_90 | 103529 | 104374 | - | 3.A.1.105.12 |
| CAZyme | Rep_893_c_6 | Rep_893_c_6_91 | 104374 | 105600 | - | GT5 |
| pfam | Rep_893_c_6 | Rep_893_c_6_92 | 105689 | 106927 | + | NTP_transferase | Hexapep_GlmU |
| pfam | Rep_893_c_6 | Rep_893_c_6_93 | 106924 | 107856 | + | Hydrolase | Hydrolase_3 | HAD |
| CAZyme | Rep_893_c_6 | Rep_893_c_6_94 | 107863 | 109203 | - | GH20 |
Gene ID: Rep_893_c_6_88
Type: TC
Location: 101971 - 103062 (-)
Type: TC
Location: 101971 - 103062 (-)
Gene ID: Rep_893_c_6_89
Type: pfam
Location: 103075 - 103515 (-)
Type: pfam
Location: 103075 - 103515 (-)
Gene ID: Rep_893_c_6_90
Type: TC
Location: 103529 - 104374 (-)
Type: TC
Location: 103529 - 104374 (-)
Gene ID: Rep_893_c_6_91
Type: CAZyme
Location: 104374 - 105600 (-)
Type: CAZyme
Location: 104374 - 105600 (-)
Gene ID: Rep_893_c_6_92
Type: pfam
Location: 105689 - 106927 (+)
Type: pfam
Location: 105689 - 106927 (+)
Gene ID: Rep_893_c_6_93
Type: pfam
Location: 106924 - 107856 (+)
Type: pfam
Location: 106924 - 107856 (+)
Gene ID: Rep_893_c_6_94
Type: CAZyme
Location: 107863 - 109203 (-)
Type: CAZyme
Location: 107863 - 109203 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia radingae_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.