Cluster: Rep_893_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_893
- CGC Family ID: CGCFAM_05811
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_893_c_5 | Rep_893_c_5_91 | 102959 | 104602 | + | GH123 |
| pfam | Rep_893_c_5 | Rep_893_c_5_92 | 104663 | 106519 | - | tRNA-synt_2 | tRNA_anti-codon | GAD |
| pfam | Rep_893_c_5 | Rep_893_c_5_93 | 106609 | 108000 | + | Sugar_tr | MFS_1 |
| TC | Rep_893_c_5 | Rep_893_c_5_94 | 108205 | 110241 | + | 3.A.18.1.1 |
Gene ID: Rep_893_c_5_91
Type: CAZyme
Location: 102959 - 104602 (+)
Type: CAZyme
Location: 102959 - 104602 (+)
Gene ID: Rep_893_c_5_92
Type: pfam
Location: 104663 - 106519 (-)
Type: pfam
Location: 104663 - 106519 (-)
Gene ID: Rep_893_c_5_93
Type: pfam
Location: 106609 - 108000 (+)
Type: pfam
Location: 106609 - 108000 (+)
Gene ID: Rep_893_c_5_94
Type: TC
Location: 108205 - 110241 (+)
Type: TC
Location: 108205 - 110241 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia radingae_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.