Cluster: Rep_892_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_892
- CGC Family ID: CGCFAM_01884
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_892_c_9 | Rep_892_c_9_24 | 27547 | 28611 | + | GT2 |
| TC | Rep_892_c_9 | Rep_892_c_9_25 | 28656 | 29891 | - | 3.A.1.103.5 |
| TC | Rep_892_c_9 | Rep_892_c_9_26 | 29894 | 30763 | - | 3.A.1.103.5 |
| pfam | Rep_892_c_9 | Rep_892_c_9_27 | 30885 | 31988 | - | Acyl_transf_3 |
| pfam | Rep_892_c_9 | Rep_892_c_9_28 | 31985 | 33865 | - | RgpF |
| CAZyme | Rep_892_c_9 | Rep_892_c_9_29 | 34085 | 35827 | + | GH25 |
Gene ID: Rep_892_c_9_24
Type: CAZyme
Location: 27547 - 28611 (+)
Type: CAZyme
Location: 27547 - 28611 (+)
Gene ID: Rep_892_c_9_25
Type: TC
Location: 28656 - 29891 (-)
Type: TC
Location: 28656 - 29891 (-)
Gene ID: Rep_892_c_9_26
Type: TC
Location: 29894 - 30763 (-)
Type: TC
Location: 29894 - 30763 (-)
Gene ID: Rep_892_c_9_27
Type: pfam
Location: 30885 - 31988 (-)
Type: pfam
Location: 30885 - 31988 (-)
Gene ID: Rep_892_c_9_28
Type: pfam
Location: 31985 - 33865 (-)
Type: pfam
Location: 31985 - 33865 (-)
Gene ID: Rep_892_c_9_29
Type: CAZyme
Location: 34085 - 35827 (+)
Type: CAZyme
Location: 34085 - 35827 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia culturomici
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.