dbCAN Logo

Cluster: Rep_892_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_892_c_6 Rep_892_c_6_11 8589 9845 + 2.A.49.5.5
TC Rep_892_c_6 Rep_892_c_6_12 9993 10931 - 8.A.5.1.4
pfam Rep_892_c_6 Rep_892_c_6_13 11066 12058 - Ferrochelatase
pfam Rep_892_c_6 Rep_892_c_6_14 12251 15004 - TQ | TQ
CAZyme Rep_892_c_6 Rep_892_c_6_15 15261 20474 - CBM67 | GH3 | GH78
TF Rep_892_c_6 Rep_892_c_6_16 20633 21643 + LacI
TC Rep_892_c_6 Rep_892_c_6_17 21879 23270 + 2.A.2.3.2
CAZyme Rep_892_c_6 Rep_892_c_6_18 23279 24868 + GH43_35
Gene ID: Rep_892_c_6_11
Type: TC
Location: 8589 - 9845 (+)
Gene ID: Rep_892_c_6_12
Type: TC
Location: 9993 - 10931 (-)
Gene ID: Rep_892_c_6_13
Type: pfam
Location: 11066 - 12058 (-)
Gene ID: Rep_892_c_6_14
Type: pfam
Location: 12251 - 15004 (-)
Gene ID: Rep_892_c_6_15
Type: CAZyme
Location: 15261 - 20474 (-)
Gene ID: Rep_892_c_6_16
Type: TF
Location: 20633 - 21643 (+)
Gene ID: Rep_892_c_6_17
Type: TC
Location: 21879 - 23270 (+)
Gene ID: Rep_892_c_6_18
Type: CAZyme
Location: 23279 - 24868 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List