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Cluster: Rep_892_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_892_c_92 Rep_892_c_92_1 3 758 - 2.A.78.1.2
CAZyme Rep_892_c_92 Rep_892_c_92_2 1098 1985 - GH114
CAZyme Rep_892_c_92 Rep_892_c_92_3 2009 3325 - GH4
TF Rep_892_c_92 Rep_892_c_92_4 3461 4273 + HTH_DeoR
STP Rep_892_c_92 Rep_892_c_92_5 4493 5473 - PfkB
TC Rep_892_c_92 Rep_892_c_92_6 5470 6390 - 3.A.1.1.36
TC Rep_892_c_92 Rep_892_c_92_7 6414 7334 - 3.A.1.1.4
TC Rep_892_c_92 Rep_892_c_92_8 7331 8617 - 3.A.1.1.44
Gene ID: Rep_892_c_92_1
Type: TC
Location: 3 - 758 (-)
Gene ID: Rep_892_c_92_2
Type: CAZyme
Location: 1098 - 1985 (-)
Gene ID: Rep_892_c_92_3
Type: CAZyme
Location: 2009 - 3325 (-)
Gene ID: Rep_892_c_92_4
Type: TF
Location: 3461 - 4273 (+)
Gene ID: Rep_892_c_92_5
Type: STP
Location: 4493 - 5473 (-)
Gene ID: Rep_892_c_92_6
Type: TC
Location: 5470 - 6390 (-)
Gene ID: Rep_892_c_92_7
Type: TC
Location: 6414 - 7334 (-)
Gene ID: Rep_892_c_92_8
Type: TC
Location: 7331 - 8617 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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