Cluster: Rep_892_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_892
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_892_c_39 | Rep_892_c_39_1 | 711 | 1607 | + | 3.A.1.1.4 |
| TC | Rep_892_c_39 | Rep_892_c_39_2 | 1732 | 2469 | + | 3.A.1.1.36 |
| CAZyme | Rep_892_c_39 | Rep_892_c_39_3 | 2474 | 5002 | + | GH116 |
| TF | Rep_892_c_39 | Rep_892_c_39_4 | 5021 | 6040 | - | LacI |
| CAZyme | Rep_892_c_39 | Rep_892_c_39_5 | 6137 | 7279 | + | GH172 |
| TC | Rep_892_c_39 | Rep_892_c_39_6 | 8404 | 9315 | - | 1.B.50.1.2 |
Gene ID: Rep_892_c_39_1
Type: TC
Location: 711 - 1607 (+)
Type: TC
Location: 711 - 1607 (+)
Gene ID: Rep_892_c_39_2
Type: TC
Location: 1732 - 2469 (+)
Type: TC
Location: 1732 - 2469 (+)
Gene ID: Rep_892_c_39_3
Type: CAZyme
Location: 2474 - 5002 (+)
Type: CAZyme
Location: 2474 - 5002 (+)
Gene ID: Rep_892_c_39_4
Type: TF
Location: 5021 - 6040 (-)
Type: TF
Location: 5021 - 6040 (-)
Gene ID: Rep_892_c_39_5
Type: CAZyme
Location: 6137 - 7279 (+)
Type: CAZyme
Location: 6137 - 7279 (+)
Gene ID: Rep_892_c_39_6
Type: TC
Location: 8404 - 9315 (-)
Type: TC
Location: 8404 - 9315 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia culturomici
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.