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Cluster: Rep_892_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_892_c_30 Rep_892_c_30_2 807 4226 + 3.A.1.122.2
peptidase Rep_892_c_30 Rep_892_c_30_3 4284 4862 + C56.UNW
CAZyme Rep_892_c_30 Rep_892_c_30_4 4918 6348 + GH13_5
STP Rep_892_c_30 Rep_892_c_30_5 6468 7175 + Nitroreductase
pfam Rep_892_c_30 Rep_892_c_30_6 7175 8086 + TatD_DNase
CAZyme Rep_892_c_30 Rep_892_c_30_7 8267 9442 + GH23
CAZyme Rep_892_c_30 Rep_892_c_30_8 9601 11013 + GH23
pfam Rep_892_c_30 Rep_892_c_30_9 11039 12061 + RrnaAD
pfam Rep_892_c_30 Rep_892_c_30_10 12054 13025 + GHMP_kinases_N | GHMP_kinases_C
TC Rep_892_c_30 Rep_892_c_30_11 13025 14890 + 3.A.1.120.6
Gene ID: Rep_892_c_30_2
Type: TC
Location: 807 - 4226 (+)
Gene ID: Rep_892_c_30_3
Type: peptidase
Location: 4284 - 4862 (+)
Gene ID: Rep_892_c_30_4
Type: CAZyme
Location: 4918 - 6348 (+)
Gene ID: Rep_892_c_30_5
Type: STP
Location: 6468 - 7175 (+)
Gene ID: Rep_892_c_30_6
Type: pfam
Location: 7175 - 8086 (+)
Gene ID: Rep_892_c_30_7
Type: CAZyme
Location: 8267 - 9442 (+)
Gene ID: Rep_892_c_30_8
Type: CAZyme
Location: 9601 - 11013 (+)
Gene ID: Rep_892_c_30_9
Type: pfam
Location: 11039 - 12061 (+)
Gene ID: Rep_892_c_30_10
Type: pfam
Location: 12054 - 13025 (+)
Gene ID: Rep_892_c_30_11
Type: TC
Location: 13025 - 14890 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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