Cluster: Rep_892_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_892
- CGC Family ID: CGCFAM_02107
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_892_c_17 | Rep_892_c_17_16 | 16690 | 18048 | + | 2.A.8.1.7 |
| TC | Rep_892_c_17 | Rep_892_c_17_17 | 18287 | 19993 | + | 1.I.1.1.3 |
| NULL(UNKNOWN) | Rep_892_c_17 | Rep_892_c_17_18 | 20126 | 20938 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_892_c_17 | Rep_892_c_17_19 | 20938 | 21642 | - | 3.A.1.132.6 |
| TF | Rep_892_c_17 | Rep_892_c_17_20 | 21639 | 22061 | - | GntR |
| CAZyme | Rep_892_c_17 | Rep_892_c_17_21 | 22438 | 24804 | - | GT35 |
| TC | Rep_892_c_17 | Rep_892_c_17_22 | 25062 | 25700 | - | 2.A.95.1.6 |
Gene ID: Rep_892_c_17_16
Type: TC
Location: 16690 - 18048 (+)
Type: TC
Location: 16690 - 18048 (+)
Gene ID: Rep_892_c_17_17
Type: TC
Location: 18287 - 19993 (+)
Type: TC
Location: 18287 - 19993 (+)
Gene ID: Rep_892_c_17_18
Type:
Location: 20126 - 20938 (-)
Type:
Location: 20126 - 20938 (-)
Gene ID: Rep_892_c_17_19
Type: TC
Location: 20938 - 21642 (-)
Type: TC
Location: 20938 - 21642 (-)
Gene ID: Rep_892_c_17_20
Type: TF
Location: 21639 - 22061 (-)
Type: TF
Location: 21639 - 22061 (-)
Gene ID: Rep_892_c_17_21
Type: CAZyme
Location: 22438 - 24804 (-)
Type: CAZyme
Location: 22438 - 24804 (-)
Gene ID: Rep_892_c_17_22
Type: TC
Location: 25062 - 25700 (-)
Type: TC
Location: 25062 - 25700 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia culturomici
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.