Cluster: Rep_892_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_892
- CGC Family ID: CGCFAM_01347
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_892_c_0 | Rep_892_c_0_43 | 49517 | 50740 | + | GT4 |
| TC | Rep_892_c_0 | Rep_892_c_0_44 | 50782 | 51570 | + | 3.A.1.23.3 |
| pfam | Rep_892_c_0 | Rep_892_c_0_45 | 51582 | 52043 | + | NfeD |
| TC | Rep_892_c_0 | Rep_892_c_0_46 | 52048 | 52947 | + | 8.A.21.2.2 |
Gene ID: Rep_892_c_0_43
Type: CAZyme
Location: 49517 - 50740 (+)
Type: CAZyme
Location: 49517 - 50740 (+)
Gene ID: Rep_892_c_0_44
Type: TC
Location: 50782 - 51570 (+)
Type: TC
Location: 50782 - 51570 (+)
Gene ID: Rep_892_c_0_45
Type: pfam
Location: 51582 - 52043 (+)
Type: pfam
Location: 51582 - 52043 (+)
Gene ID: Rep_892_c_0_46
Type: TC
Location: 52048 - 52947 (+)
Type: TC
Location: 52048 - 52947 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia culturomici
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.