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Cluster: Rep_875_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_875_c_0 Rep_875_c_0_165 199693 200445 - 3.A.1.125.3
pfam Rep_875_c_0 Rep_875_c_0_166 200570 201379 + TehB | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
STP Rep_875_c_0 Rep_875_c_0_167 201682 202692 + Peripla_BP_2
TC Rep_875_c_0 Rep_875_c_0_168 202692 203855 + 3.A.1.14.21
TC Rep_875_c_0 Rep_875_c_0_169 203852 204622 + 3.A.1.14.13
sulfatase Rep_875_c_0 Rep_875_c_0_170 204706 206163 + S1_6
TC Rep_875_c_0 Rep_875_c_0_171 206208 207500 + 2.A.49.5.3
CAZyme Rep_875_c_0 Rep_875_c_0_172 207557 209923 + GT35
Gene ID: Rep_875_c_0_165
Type: TC
Location: 199693 - 200445 (-)
Gene ID: Rep_875_c_0_166
Type: pfam
Location: 200570 - 201379 (+)
Gene ID: Rep_875_c_0_167
Type: STP
Location: 201682 - 202692 (+)
Gene ID: Rep_875_c_0_168
Type: TC
Location: 202692 - 203855 (+)
Gene ID: Rep_875_c_0_169
Type: TC
Location: 203852 - 204622 (+)
Gene ID: Rep_875_c_0_170
Type: sulfatase
Location: 204706 - 206163 (+)
Gene ID: Rep_875_c_0_171
Type: TC
Location: 206208 - 207500 (+)
Gene ID: Rep_875_c_0_172
Type: CAZyme
Location: 207557 - 209923 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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