Cluster: Rep_875_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_875
- CGC Family ID: CGCFAM_05502
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_875_c_0 | Rep_875_c_0_136 | 160596 | 163367 | + | CBM50 | CBM50 |
| TC | Rep_875_c_0 | Rep_875_c_0_137 | 163378 | 164712 | - | 2.A.1.21.16 |
| TC | Rep_875_c_0 | Rep_875_c_0_138 | 165069 | 166505 | + | 2.A.3.6.1 |
Gene ID: Rep_875_c_0_136
Type: CAZyme
Location: 160596 - 163367 (+)
Type: CAZyme
Location: 160596 - 163367 (+)
Gene ID: Rep_875_c_0_137
Type: TC
Location: 163378 - 164712 (-)
Type: TC
Location: 163378 - 164712 (-)
Gene ID: Rep_875_c_0_138
Type: TC
Location: 165069 - 166505 (+)
Type: TC
Location: 165069 - 166505 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Propionibacteriaceae
Genus
Cutibacterium
Species
Cutibacterium avidum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.