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Cluster: Rep_875_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_875_c_14 Rep_875_c_14_51 51516 52595 - 3.A.1.5.37
TC Rep_875_c_14 Rep_875_c_14_52 52585 53622 - 3.A.1.5.35
TC Rep_875_c_14 Rep_875_c_14_53 53632 54615 - 3.A.1.5.35
TC Rep_875_c_14 Rep_875_c_14_54 54608 55531 - 3.A.1.5.35
TC Rep_875_c_14 Rep_875_c_14_55 55603 57270 - 3.A.1.5.37
peptidase Rep_875_c_14 Rep_875_c_14_56 57577 58116 - C56.UNW
pfam Rep_875_c_14 Rep_875_c_14_57 58596 59498 - Metallophos | Metallophos_2
CAZyme Rep_875_c_14 Rep_875_c_14_58 59500 62016 - GT51
STP Rep_875_c_14 Rep_875_c_14_59 62312 63586 + ACT | ACT
pfam Rep_875_c_14 Rep_875_c_14_60 63594 65414 + MurJ
CAZyme Rep_875_c_14 Rep_875_c_14_61 65492 67051 - CE4
Gene ID: Rep_875_c_14_51
Type: TC
Location: 51516 - 52595 (-)
Gene ID: Rep_875_c_14_52
Type: TC
Location: 52585 - 53622 (-)
Gene ID: Rep_875_c_14_53
Type: TC
Location: 53632 - 54615 (-)
Gene ID: Rep_875_c_14_54
Type: TC
Location: 54608 - 55531 (-)
Gene ID: Rep_875_c_14_55
Type: TC
Location: 55603 - 57270 (-)
Gene ID: Rep_875_c_14_56
Type: peptidase
Location: 57577 - 58116 (-)
Gene ID: Rep_875_c_14_57
Type: pfam
Location: 58596 - 59498 (-)
Gene ID: Rep_875_c_14_58
Type: CAZyme
Location: 59500 - 62016 (-)
Gene ID: Rep_875_c_14_59
Type: STP
Location: 62312 - 63586 (+)
Gene ID: Rep_875_c_14_60
Type: pfam
Location: 63594 - 65414 (+)
Gene ID: Rep_875_c_14_61
Type: CAZyme
Location: 65492 - 67051 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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