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Cluster: Rep_875_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_875_c_10 Rep_875_c_10_41 43485 44144 - 3.A.1.125.1
pfam Rep_875_c_10 Rep_875_c_10_42 44141 45241 - FtsX
pfam Rep_875_c_10 Rep_875_c_10_43 45327 46289 + Hexapep_2 | THDPS_M | THDPS_N
CAZyme Rep_875_c_10 Rep_875_c_10_44 46291 47238 + GH184
STP Rep_875_c_10 Rep_875_c_10_45 47242 48351 - Aminotran_1_2
STP Rep_875_c_10 Rep_875_c_10_46 48348 48668 - Fer4
TC Rep_875_c_10 Rep_875_c_10_47 48817 50238 - 3.D.2.1.1
TC Rep_875_c_10 Rep_875_c_10_48 50242 51939 - 3.D.2.1.1
Gene ID: Rep_875_c_10_41
Type: TC
Location: 43485 - 44144 (-)
Gene ID: Rep_875_c_10_42
Type: pfam
Location: 44141 - 45241 (-)
Gene ID: Rep_875_c_10_43
Type: pfam
Location: 45327 - 46289 (+)
Gene ID: Rep_875_c_10_44
Type: CAZyme
Location: 46291 - 47238 (+)
Gene ID: Rep_875_c_10_45
Type: STP
Location: 47242 - 48351 (-)
Gene ID: Rep_875_c_10_46
Type: STP
Location: 48348 - 48668 (-)
Gene ID: Rep_875_c_10_47
Type: TC
Location: 48817 - 50238 (-)
Gene ID: Rep_875_c_10_48
Type: TC
Location: 50242 - 51939 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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