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Cluster: Rep_875_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_875_c_4 Rep_875_c_4_120 133147 135660 + GH65
TC Rep_875_c_4 Rep_875_c_4_121 135757 137838 - 4.A.1.2.5
STP Rep_875_c_4 Rep_875_c_4_122 137935 138729 - NUDIX
CAZyme Rep_875_c_4 Rep_875_c_4_123 138751 140685 - CBM48 | GH13_9
pfam Rep_875_c_4 Rep_875_c_4_124 140767 142065 - APH
CAZyme Rep_875_c_4 Rep_875_c_4_125 142062 143834 - GH13_16
CAZyme Rep_875_c_4 Rep_875_c_4_126 143831 146131 - GH13_3
CAZyme Rep_875_c_4 Rep_875_c_4_127 146413 148503 - CBM48 | GH13_11
Gene ID: Rep_875_c_4_120
Type: CAZyme
Location: 133147 - 135660 (+)
Gene ID: Rep_875_c_4_121
Type: TC
Location: 135757 - 137838 (-)
Gene ID: Rep_875_c_4_122
Type: STP
Location: 137935 - 138729 (-)
Gene ID: Rep_875_c_4_123
Type: CAZyme
Location: 138751 - 140685 (-)
Gene ID: Rep_875_c_4_124
Type: pfam
Location: 140767 - 142065 (-)
Gene ID: Rep_875_c_4_125
Type: CAZyme
Location: 142062 - 143834 (-)
Gene ID: Rep_875_c_4_126
Type: CAZyme
Location: 143831 - 146131 (-)
Gene ID: Rep_875_c_4_127
Type: CAZyme
Location: 146413 - 148503 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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