Cluster: Rep_875_CGC1
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_875
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_875_c_0 | Rep_875_c_0_44 | 50729 | 51481 | - | 1.A.8.2.6 |
| TF | Rep_875_c_0 | Rep_875_c_0_45 | 51497 | 52615 | + | Crp |
| peptidase | Rep_875_c_0 | Rep_875_c_0_46 | 52695 | 54098 | - | S01.UPC |
| CAZyme | Rep_875_c_0 | Rep_875_c_0_47 | 54306 | 56549 | - | GH43_3 |
| TC | Rep_875_c_0 | Rep_875_c_0_48 | 56557 | 57363 | - | 3.A.1.1.36 |
| TC | Rep_875_c_0 | Rep_875_c_0_49 | 57384 | 58352 | - | 3.A.1.1.36 |
| STP | Rep_875_c_0 | Rep_875_c_0_50 | 58352 | 59680 | - | SBP_bac_1 |
| CAZyme | Rep_875_c_0 | Rep_875_c_0_51 | 59737 | 61254 | - | GH51_1 |
Gene ID: Rep_875_c_0_44
Type: TC
Location: 50729 - 51481 (-)
Type: TC
Location: 50729 - 51481 (-)
Gene ID: Rep_875_c_0_45
Type: TF
Location: 51497 - 52615 (+)
Type: TF
Location: 51497 - 52615 (+)
Gene ID: Rep_875_c_0_46
Type: peptidase
Location: 52695 - 54098 (-)
Type: peptidase
Location: 52695 - 54098 (-)
Gene ID: Rep_875_c_0_47
Type: CAZyme
Location: 54306 - 56549 (-)
Type: CAZyme
Location: 54306 - 56549 (-)
Gene ID: Rep_875_c_0_48
Type: TC
Location: 56557 - 57363 (-)
Type: TC
Location: 56557 - 57363 (-)
Gene ID: Rep_875_c_0_49
Type: TC
Location: 57384 - 58352 (-)
Type: TC
Location: 57384 - 58352 (-)
Gene ID: Rep_875_c_0_50
Type: STP
Location: 58352 - 59680 (-)
Type: STP
Location: 58352 - 59680 (-)
Gene ID: Rep_875_c_0_51
Type: CAZyme
Location: 59737 - 61254 (-)
Type: CAZyme
Location: 59737 - 61254 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Propionibacteriaceae
Genus
Cutibacterium
Species
Cutibacterium avidum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.