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Cluster: Rep_86_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_86_c_8 Rep_86_c_8_143 172194 175658 + 1.B.14.6.1
TC Rep_86_c_8 Rep_86_c_8_144 175671 177122 + 8.A.46.3.2
peptidase Rep_86_c_8 Rep_86_c_8_145 177139 178320 + C01.UNA
TC Rep_86_c_8 Rep_86_c_8_146 178930 180432 - 2.A.36.6.11
TC Rep_86_c_8 Rep_86_c_8_147 180594 182846 + 2.A.37.1.5
pfam Rep_86_c_8 Rep_86_c_8_148 183083 185440 + FtsX | FtsX | MacB_PCD
NULL(UNKNOWN) Rep_86_c_8 Rep_86_c_8_149 185593 186543 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_86_c_8 Rep_86_c_8_150 187290 188438 + CBM32
CAZyme Rep_86_c_8 Rep_86_c_8_151 188448 190784 + GH92
CAZyme Rep_86_c_8 Rep_86_c_8_152 190947 193292 + GH92
Gene ID: Rep_86_c_8_143
Type: TC
Location: 172194 - 175658 (+)
Gene ID: Rep_86_c_8_144
Type: TC
Location: 175671 - 177122 (+)
Gene ID: Rep_86_c_8_145
Type: peptidase
Location: 177139 - 178320 (+)
Gene ID: Rep_86_c_8_146
Type: TC
Location: 178930 - 180432 (-)
Gene ID: Rep_86_c_8_147
Type: TC
Location: 180594 - 182846 (+)
Gene ID: Rep_86_c_8_148
Type: pfam
Location: 183083 - 185440 (+)
Gene ID: Rep_86_c_8_149
Type:
Location: 185593 - 186543 (-)
Gene ID: Rep_86_c_8_150
Type: CAZyme
Location: 187290 - 188438 (+)
Gene ID: Rep_86_c_8_151
Type: CAZyme
Location: 188448 - 190784 (+)
Gene ID: Rep_86_c_8_152
Type: CAZyme
Location: 190947 - 193292 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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