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Cluster: Rep_86_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_86_c_48 Rep_86_c_48_31 34214 37393 + GH31_18
TC Rep_86_c_48 Rep_86_c_48_32 37519 38115 + 1.B.44.2.1
TC Rep_86_c_48 Rep_86_c_48_33 38581 39177 + 1.B.44.2.1
CAZyme Rep_86_c_48 Rep_86_c_48_34 39346 40653 + GH29
TC Rep_86_c_48 Rep_86_c_48_35 40847 41275 - 1.A.22.1.1
pfam Rep_86_c_48 Rep_86_c_48_36 41286 42329 - HlyD_3 | Biotin_lipoyl_2 | HlyD_D23
pfam Rep_86_c_48 Rep_86_c_48_37 42548 43321 + Acyl-ACP_TE | Acyl-ACP_TE_C
CAZyme Rep_86_c_48 Rep_86_c_48_38 43381 44331 - GT2
pfam Rep_86_c_48 Rep_86_c_48_39 44378 44905 - DUF4199
CAZyme Rep_86_c_48 Rep_86_c_48_40 44933 45880 - GH73
Gene ID: Rep_86_c_48_31
Type: CAZyme
Location: 34214 - 37393 (+)
Gene ID: Rep_86_c_48_32
Type: TC
Location: 37519 - 38115 (+)
Gene ID: Rep_86_c_48_33
Type: TC
Location: 38581 - 39177 (+)
Gene ID: Rep_86_c_48_34
Type: CAZyme
Location: 39346 - 40653 (+)
Gene ID: Rep_86_c_48_35
Type: TC
Location: 40847 - 41275 (-)
Gene ID: Rep_86_c_48_36
Type: pfam
Location: 41286 - 42329 (-)
Gene ID: Rep_86_c_48_37
Type: pfam
Location: 42548 - 43321 (+)
Gene ID: Rep_86_c_48_38
Type: CAZyme
Location: 43381 - 44331 (-)
Gene ID: Rep_86_c_48_39
Type: pfam
Location: 44378 - 44905 (-)
Gene ID: Rep_86_c_48_40
Type: CAZyme
Location: 44933 - 45880 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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