Cluster: Rep_86_CGC24
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_86
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_86_c_34 | Rep_86_c_34_26 | 23609 | 25993 | + | 9.A.8.1.6 |
| NULL(UNKNOWN) | Rep_86_c_34 | Rep_86_c_34_27 | 26136 | 26306 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_86_c_34 | Rep_86_c_34_28 | 26303 | 27055 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_86_c_34 | Rep_86_c_34_29 | 27157 | 28539 | - | GH23 |
| pfam | Rep_86_c_34 | Rep_86_c_34_30 | 28640 | 30592 | - | Porin_10 |
| pfam | Rep_86_c_34 | Rep_86_c_34_31 | 30670 | 32376 | + | tRNA-synt_1c | tRNA-synt_1c_C | tRNA-synt_1c_C2 |
| TC | Rep_86_c_34 | Rep_86_c_34_32 | 32378 | 33256 | + | 2.A.115.1.1 |
Gene ID: Rep_86_c_34_26
Type: TC
Location: 23609 - 25993 (+)
Type: TC
Location: 23609 - 25993 (+)
Gene ID: Rep_86_c_34_27
Type:
Location: 26136 - 26306 (+)
Type:
Location: 26136 - 26306 (+)
Gene ID: Rep_86_c_34_28
Type:
Location: 26303 - 27055 (-)
Type:
Location: 26303 - 27055 (-)
Gene ID: Rep_86_c_34_29
Type: CAZyme
Location: 27157 - 28539 (-)
Type: CAZyme
Location: 27157 - 28539 (-)
Gene ID: Rep_86_c_34_30
Type: pfam
Location: 28640 - 30592 (-)
Type: pfam
Location: 28640 - 30592 (-)
Gene ID: Rep_86_c_34_31
Type: pfam
Location: 30670 - 32376 (+)
Type: pfam
Location: 30670 - 32376 (+)
Gene ID: Rep_86_c_34_32
Type: TC
Location: 32378 - 33256 (+)
Type: TC
Location: 32378 - 33256 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Marinifilaceae
Genus
Odoribacter
Species
Odoribacter sp023400335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.