Cluster: Rep_86_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_86
- CGC Family ID: CGCFAM_01868
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_86_c_26 | Rep_86_c_26_34 | 37342 | 38127 | + | 3.A.1.147.9 |
| NULL(UNKNOWN) | Rep_86_c_26 | Rep_86_c_26_35 | 38124 | 39752 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_86_c_26 | Rep_86_c_26_36 | 39760 | 42027 | - | GT51 |
| NULL(UNKNOWN) | Rep_86_c_26 | Rep_86_c_26_37 | 42169 | 42390 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_86_c_26 | Rep_86_c_26_38 | 42425 | 43567 | - | 2.A.37.2.6 |
Gene ID: Rep_86_c_26_34
Type: TC
Location: 37342 - 38127 (+)
Type: TC
Location: 37342 - 38127 (+)
Gene ID: Rep_86_c_26_35
Type:
Location: 38124 - 39752 (+)
Type:
Location: 38124 - 39752 (+)
Gene ID: Rep_86_c_26_36
Type: CAZyme
Location: 39760 - 42027 (-)
Type: CAZyme
Location: 39760 - 42027 (-)
Gene ID: Rep_86_c_26_37
Type:
Location: 42169 - 42390 (+)
Type:
Location: 42169 - 42390 (+)
Gene ID: Rep_86_c_26_38
Type: TC
Location: 42425 - 43567 (-)
Type: TC
Location: 42425 - 43567 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Marinifilaceae
Genus
Odoribacter
Species
Odoribacter sp023400335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.