Cluster: Rep_86_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_86
- CGC Family ID: CGCFAM_01604
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_86_c_23 | Rep_86_c_23_8 | 11387 | 13474 | - | GH29 |
| NULL(UNKNOWN) | Rep_86_c_23 | Rep_86_c_23_9 | 13632 | 14066 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | Rep_86_c_23 | Rep_86_c_23_10 | 14403 | 14807 | + | Glyoxalase |
| TC | Rep_86_c_23 | Rep_86_c_23_11 | 14915 | 16477 | + | 3.B.1.1.2 |
| NULL(UNKNOWN) | Rep_86_c_23 | Rep_86_c_23_12 | 16489 | 16854 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_86_c_23 | Rep_86_c_23_13 | 16866 | 17336 | + | Biotin_lipoyl |
| TC | Rep_86_c_23 | Rep_86_c_23_14 | 17348 | 19003 | + | 3.B.1.1.2 |
Gene ID: Rep_86_c_23_8
Type: CAZyme
Location: 11387 - 13474 (-)
Type: CAZyme
Location: 11387 - 13474 (-)
Gene ID: Rep_86_c_23_9
Type:
Location: 13632 - 14066 (-)
Type:
Location: 13632 - 14066 (-)
Gene ID: Rep_86_c_23_10
Type: STP
Location: 14403 - 14807 (+)
Type: STP
Location: 14403 - 14807 (+)
Gene ID: Rep_86_c_23_11
Type: TC
Location: 14915 - 16477 (+)
Type: TC
Location: 14915 - 16477 (+)
Gene ID: Rep_86_c_23_12
Type:
Location: 16489 - 16854 (+)
Type:
Location: 16489 - 16854 (+)
Gene ID: Rep_86_c_23_13
Type: pfam
Location: 16866 - 17336 (+)
Type: pfam
Location: 16866 - 17336 (+)
Gene ID: Rep_86_c_23_14
Type: TC
Location: 17348 - 19003 (+)
Type: TC
Location: 17348 - 19003 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Marinifilaceae
Genus
Odoribacter
Species
Odoribacter sp023400335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.