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Cluster: Rep_86_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_86_c_12 Rep_86_c_12_49 66688 67971 - 2.A.1.31.4
pfam Rep_86_c_12 Rep_86_c_12_50 68042 68677 - LUD_dom
TC Rep_86_c_12 Rep_86_c_12_51 68928 70601 + 2.A.53.3.11
TC Rep_86_c_12 Rep_86_c_12_52 70603 71790 + 1.B.5.1.6
pfam Rep_86_c_12 Rep_86_c_12_53 71837 72283 + DUF2059
TC Rep_86_c_12 Rep_86_c_12_54 72477 74600 - 3.A.7.7.1
TC Rep_86_c_12 Rep_86_c_12_55 74699 75067 - 9.B.55.1.2
TC Rep_86_c_12 Rep_86_c_12_56 75233 76045 - 2.A.64.3.2
pfam Rep_86_c_12 Rep_86_c_12_57 76061 76240 - TatA_B_E
peptidase Rep_86_c_12 Rep_86_c_12_58 76375 77793 + C44.UNW
CAZyme Rep_86_c_12 Rep_86_c_12_59 78127 81225 + GH2
pfam Rep_86_c_12 Rep_86_c_12_60 81270 82388 - Cyt_bd_oxida_II
TC Rep_86_c_12 Rep_86_c_12_61 82448 83998 - 3.D.4.3.2
pfam Rep_86_c_12 Rep_86_c_12_62 84003 84194 - DUF4492
TC Rep_86_c_12 Rep_86_c_12_63 84398 85504 + 2.A.86.1.11
Gene ID: Rep_86_c_12_49
Type: TC
Location: 66688 - 67971 (-)
Gene ID: Rep_86_c_12_50
Type: pfam
Location: 68042 - 68677 (-)
Gene ID: Rep_86_c_12_51
Type: TC
Location: 68928 - 70601 (+)
Gene ID: Rep_86_c_12_52
Type: TC
Location: 70603 - 71790 (+)
Gene ID: Rep_86_c_12_53
Type: pfam
Location: 71837 - 72283 (+)
Gene ID: Rep_86_c_12_54
Type: TC
Location: 72477 - 74600 (-)
Gene ID: Rep_86_c_12_55
Type: TC
Location: 74699 - 75067 (-)
Gene ID: Rep_86_c_12_56
Type: TC
Location: 75233 - 76045 (-)
Gene ID: Rep_86_c_12_57
Type: pfam
Location: 76061 - 76240 (-)
Gene ID: Rep_86_c_12_58
Type: peptidase
Location: 76375 - 77793 (+)
Gene ID: Rep_86_c_12_59
Type: CAZyme
Location: 78127 - 81225 (+)
Gene ID: Rep_86_c_12_60
Type: pfam
Location: 81270 - 82388 (-)
Gene ID: Rep_86_c_12_61
Type: TC
Location: 82448 - 83998 (-)
Gene ID: Rep_86_c_12_62
Type: pfam
Location: 84003 - 84194 (-)
Gene ID: Rep_86_c_12_63
Type: TC
Location: 84398 - 85504 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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