Cluster: Rep_866_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_866
- CGC Family ID: CGCFAM_04060
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_866_c_260 | Rep_866_c_260_2 | 440 | 1420 | + | 3.A.1.1.19 |
| TC | Rep_866_c_260 | Rep_866_c_260_3 | 1420 | 2241 | + | 3.A.1.1.31 |
| NULL(UNKNOWN) | Rep_866_c_260 | Rep_866_c_260_4 | 2241 | 2606 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_866_c_260 | Rep_866_c_260_5 | 2606 | 2791 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_866_c_260 | Rep_866_c_260_6 | 2788 | 4302 | + | GH13_16 |
| TC | Rep_866_c_260 | Rep_866_c_260_7 | 4627 | 5931 | + | 2.A.20.1.3 |
Gene ID: Rep_866_c_260_2
Type: TC
Location: 440 - 1420 (+)
Type: TC
Location: 440 - 1420 (+)
Gene ID: Rep_866_c_260_3
Type: TC
Location: 1420 - 2241 (+)
Type: TC
Location: 1420 - 2241 (+)
Gene ID: Rep_866_c_260_4
Type:
Location: 2241 - 2606 (+)
Type:
Location: 2241 - 2606 (+)
Gene ID: Rep_866_c_260_5
Type:
Location: 2606 - 2791 (+)
Type:
Location: 2606 - 2791 (+)
Gene ID: Rep_866_c_260_6
Type: CAZyme
Location: 2788 - 4302 (+)
Type: CAZyme
Location: 2788 - 4302 (+)
Gene ID: Rep_866_c_260_7
Type: TC
Location: 4627 - 5931 (+)
Type: TC
Location: 4627 - 5931 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Corynebacterium
Species
Corynebacterium simulans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.