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Cluster: Rep_863_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_863_c_18 Rep_863_c_18_26 26672 28525 + 9.B.97.5.1
pfam Rep_863_c_18 Rep_863_c_18_27 28602 28922 - ABM
NULL(UNKNOWN) Rep_863_c_18 Rep_863_c_18_28 29022 29612 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_863_c_18 Rep_863_c_18_29 29770 30684 + 2.A.69.3.1
TC Rep_863_c_18 Rep_863_c_18_30 30693 32528 - 3.A.1.120.5
pfam Rep_863_c_18 Rep_863_c_18_31 32578 33516 - GHMP_kinases_N | GHMP_kinases_C
pfam Rep_863_c_18 Rep_863_c_18_32 33513 34355 - RrnaAD
CAZyme Rep_863_c_18 Rep_863_c_18_33 34389 35537 - GH23
Gene ID: Rep_863_c_18_26
Type: TC
Location: 26672 - 28525 (+)
Gene ID: Rep_863_c_18_27
Type: pfam
Location: 28602 - 28922 (-)
Gene ID: Rep_863_c_18_28
Type:
Location: 29022 - 29612 (-)
Gene ID: Rep_863_c_18_29
Type: TC
Location: 29770 - 30684 (+)
Gene ID: Rep_863_c_18_30
Type: TC
Location: 30693 - 32528 (-)
Gene ID: Rep_863_c_18_31
Type: pfam
Location: 32578 - 33516 (-)
Gene ID: Rep_863_c_18_32
Type: pfam
Location: 33513 - 34355 (-)
Gene ID: Rep_863_c_18_33
Type: CAZyme
Location: 34389 - 35537 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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