dbCAN Logo

Cluster: Rep_863_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_863_c_91 Rep_863_c_91_23 18242 19231 + 3.A.1.1.45
TC Rep_863_c_91 Rep_863_c_91_24 19357 20646 + 3.A.1.1.41
TC Rep_863_c_91 Rep_863_c_91_25 20822 21799 + 3.A.1.1.19
TC Rep_863_c_91 Rep_863_c_91_26 21796 22617 + 3.A.1.1.31
NULL(UNKNOWN) Rep_863_c_91 Rep_863_c_91_27 22617 22802 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_863_c_91 Rep_863_c_91_28 22799 24301 + GH13_16
TC Rep_863_c_91 Rep_863_c_91_29 24570 25859 + 2.A.20.1.3
NULL(UNKNOWN) Rep_863_c_91 Rep_863_c_91_30 25871 26173 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_863_c_91 Rep_863_c_91_31 26432 26683 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_863_c_91 Rep_863_c_91_32 26911 28524 + 3.B.1.1.5
TC Rep_863_c_91 Rep_863_c_91_33 28585 29916 + 3.B.1.1.5
Gene ID: Rep_863_c_91_23
Type: TC
Location: 18242 - 19231 (+)
Gene ID: Rep_863_c_91_24
Type: TC
Location: 19357 - 20646 (+)
Gene ID: Rep_863_c_91_25
Type: TC
Location: 20822 - 21799 (+)
Gene ID: Rep_863_c_91_26
Type: TC
Location: 21796 - 22617 (+)
Gene ID: Rep_863_c_91_27
Type:
Location: 22617 - 22802 (+)
Gene ID: Rep_863_c_91_28
Type: CAZyme
Location: 22799 - 24301 (+)
Gene ID: Rep_863_c_91_29
Type: TC
Location: 24570 - 25859 (+)
Gene ID: Rep_863_c_91_30
Type:
Location: 25871 - 26173 (+)
Gene ID: Rep_863_c_91_31
Type:
Location: 26432 - 26683 (+)
Gene ID: Rep_863_c_91_32
Type: TC
Location: 26911 - 28524 (+)
Gene ID: Rep_863_c_91_33
Type: TC
Location: 28585 - 29916 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List