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Cluster: Rep_863_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_863_c_56 Rep_863_c_56_22 23644 25302 + 4.C.1.1.4
TC Rep_863_c_56 Rep_863_c_56_23 26383 28536 - 4.A.1.1.2
pfam Rep_863_c_56 Rep_863_c_56_24 28587 29351 - Glucosamine_iso
CAZyme Rep_863_c_56 Rep_863_c_56_25 29385 30542 - CE9
pfam Rep_863_c_56 Rep_863_c_56_26 30778 31233 + DUF4442
pfam Rep_863_c_56 Rep_863_c_56_27 31452 32660 - DNA_pol3_delta2
TC Rep_863_c_56 Rep_863_c_56_28 32698 34230 + 8.A.59.2.2
TC Rep_863_c_56 Rep_863_c_56_29 34344 35636 + 9.B.169.1.3
NULL(UNKNOWN) Rep_863_c_56 Rep_863_c_56_30 35473 36180 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_863_c_56 Rep_863_c_56_31 36188 39118 - 3.A.7.7.1
Gene ID: Rep_863_c_56_22
Type: TC
Location: 23644 - 25302 (+)
Gene ID: Rep_863_c_56_23
Type: TC
Location: 26383 - 28536 (-)
Gene ID: Rep_863_c_56_24
Type: pfam
Location: 28587 - 29351 (-)
Gene ID: Rep_863_c_56_25
Type: CAZyme
Location: 29385 - 30542 (-)
Gene ID: Rep_863_c_56_26
Type: pfam
Location: 30778 - 31233 (+)
Gene ID: Rep_863_c_56_27
Type: pfam
Location: 31452 - 32660 (-)
Gene ID: Rep_863_c_56_28
Type: TC
Location: 32698 - 34230 (+)
Gene ID: Rep_863_c_56_29
Type: TC
Location: 34344 - 35636 (+)
Gene ID: Rep_863_c_56_30
Type:
Location: 35473 - 36180 (-)
Gene ID: Rep_863_c_56_31
Type: TC
Location: 36188 - 39118 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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