Cluster: Rep_863_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_863
- CGC Family ID: CGCFAM_03685
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_863_c_34 | Rep_863_c_34_19 | 16001 | 17578 | + | 3.A.1.5.35 |
| pfam | Rep_863_c_34 | Rep_863_c_34_20 | 17626 | 18024 | + | LMWPc |
| CAZyme | Rep_863_c_34 | Rep_863_c_34_21 | 18174 | 20294 | - | CBM48 | GH13_9 |
| CAZyme | Rep_863_c_34 | Rep_863_c_34_22 | 20401 | 22413 | - | GH13_3 |
| TC | Rep_863_c_34 | Rep_863_c_34_23 | 22489 | 23337 | + | 3.A.1.14.13 |
Gene ID: Rep_863_c_34_19
Type: TC
Location: 16001 - 17578 (+)
Type: TC
Location: 16001 - 17578 (+)
Gene ID: Rep_863_c_34_20
Type: pfam
Location: 17626 - 18024 (+)
Type: pfam
Location: 17626 - 18024 (+)
Gene ID: Rep_863_c_34_21
Type: CAZyme
Location: 18174 - 20294 (-)
Type: CAZyme
Location: 18174 - 20294 (-)
Gene ID: Rep_863_c_34_22
Type: CAZyme
Location: 20401 - 22413 (-)
Type: CAZyme
Location: 20401 - 22413 (-)
Gene ID: Rep_863_c_34_23
Type: TC
Location: 22489 - 23337 (+)
Type: TC
Location: 22489 - 23337 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Corynebacterium
Species
Corynebacterium sp946222625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.