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Cluster: Rep_857_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_857_c_26 Rep_857_c_26_74 89539 92001 - GH13_26
pfam Rep_857_c_26 Rep_857_c_26_75 92115 93758 - RNase_T
TF Rep_857_c_26 Rep_857_c_26_76 94082 94324 + HTH_3
CAZyme Rep_857_c_26 Rep_857_c_26_77 94497 96638 - GH13_11
TC Rep_857_c_26 Rep_857_c_26_78 96973 98409 + 3.B.1.1.6
TC Rep_857_c_26 Rep_857_c_26_79 98433 100046 + 3.B.1.1.5
NULL(UNKNOWN) Rep_857_c_26 Rep_857_c_26_80 100046 100351 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_857_c_26 Rep_857_c_26_81 100423 100782 + Biotin_lipoyl | Biotin_lipoyl_2
TC Rep_857_c_26 Rep_857_c_26_82 100872 102236 + 2.A.8.1.12
Gene ID: Rep_857_c_26_74
Type: CAZyme
Location: 89539 - 92001 (-)
Gene ID: Rep_857_c_26_75
Type: pfam
Location: 92115 - 93758 (-)
Gene ID: Rep_857_c_26_76
Type: TF
Location: 94082 - 94324 (+)
Gene ID: Rep_857_c_26_77
Type: CAZyme
Location: 94497 - 96638 (-)
Gene ID: Rep_857_c_26_78
Type: TC
Location: 96973 - 98409 (+)
Gene ID: Rep_857_c_26_79
Type: TC
Location: 98433 - 100046 (+)
Gene ID: Rep_857_c_26_80
Type:
Location: 100046 - 100351 (+)
Gene ID: Rep_857_c_26_81
Type: pfam
Location: 100423 - 100782 (+)
Gene ID: Rep_857_c_26_82
Type: TC
Location: 100872 - 102236 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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