Cluster: Rep_857_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_857
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_857_c_26 | Rep_857_c_26_40 | 47254 | 48360 | + | 9.B.146.1.3 |
| pfam | Rep_857_c_26 | Rep_857_c_26_41 | 48357 | 49835 | + | Mur_ligase_C | Mur_ligase_M |
| TC | Rep_857_c_26 | Rep_857_c_26_42 | 49828 | 51636 | + | 2.A.103.1.4 |
| CAZyme | Rep_857_c_26 | Rep_857_c_26_43 | 51641 | 52813 | + | GT28 |
Gene ID: Rep_857_c_26_40
Type: TC
Location: 47254 - 48360 (+)
Type: TC
Location: 47254 - 48360 (+)
Gene ID: Rep_857_c_26_41
Type: pfam
Location: 48357 - 49835 (+)
Type: pfam
Location: 48357 - 49835 (+)
Gene ID: Rep_857_c_26_42
Type: TC
Location: 49828 - 51636 (+)
Type: TC
Location: 49828 - 51636 (+)
Gene ID: Rep_857_c_26_43
Type: CAZyme
Location: 51641 - 52813 (+)
Type: CAZyme
Location: 51641 - 52813 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Corynebacterium
Species
Corynebacterium jeikeium_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.