Cluster: Rep_857_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_857
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_857_c_15 | Rep_857_c_15_6 | 4128 | 5270 | - | GT4 |
| pfam | Rep_857_c_15 | Rep_857_c_15_7 | 5273 | 6175 | - | Lip_A_acyltrans |
| TC | Rep_857_c_15 | Rep_857_c_15_8 | 6187 | 6888 | - | 4.F.1.3.1 |
| pfam | Rep_857_c_15 | Rep_857_c_15_9 | 6882 | 7559 | - | HIT | CwfJ_C_1 | DcpS_C |
| pfam | Rep_857_c_15 | Rep_857_c_15_10 | 7668 | 9728 | - | tRNA-synt_2b | HGTP_anticodon | tRNA_SAD |
| TC | Rep_857_c_15 | Rep_857_c_15_11 | 9822 | 11048 | - | 2.A.108.2.3 |
Gene ID: Rep_857_c_15_6
Type: CAZyme
Location: 4128 - 5270 (-)
Type: CAZyme
Location: 4128 - 5270 (-)
Gene ID: Rep_857_c_15_7
Type: pfam
Location: 5273 - 6175 (-)
Type: pfam
Location: 5273 - 6175 (-)
Gene ID: Rep_857_c_15_8
Type: TC
Location: 6187 - 6888 (-)
Type: TC
Location: 6187 - 6888 (-)
Gene ID: Rep_857_c_15_9
Type: pfam
Location: 6882 - 7559 (-)
Type: pfam
Location: 6882 - 7559 (-)
Gene ID: Rep_857_c_15_10
Type: pfam
Location: 7668 - 9728 (-)
Type: pfam
Location: 7668 - 9728 (-)
Gene ID: Rep_857_c_15_11
Type: TC
Location: 9822 - 11048 (-)
Type: TC
Location: 9822 - 11048 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Corynebacterium
Species
Corynebacterium jeikeium_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.