Cluster: Rep_857_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_857
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_857_c_12 | Rep_857_c_12_61 | 71265 | 72701 | + | 2.A.66.1.9 |
| CAZyme | Rep_857_c_12 | Rep_857_c_12_62 | 72776 | 74809 | + | GT85 |
| CAZyme | Rep_857_c_12 | Rep_857_c_12_63 | 74942 | 78340 | + | GT53 |
| STP | Rep_857_c_12 | Rep_857_c_12_64 | 78381 | 79409 | + | NUDIX |
| CAZyme | Rep_857_c_12 | Rep_857_c_12_65 | 79437 | 80363 | - | GH25 |
Gene ID: Rep_857_c_12_61
Type: TC
Location: 71265 - 72701 (+)
Type: TC
Location: 71265 - 72701 (+)
Gene ID: Rep_857_c_12_62
Type: CAZyme
Location: 72776 - 74809 (+)
Type: CAZyme
Location: 72776 - 74809 (+)
Gene ID: Rep_857_c_12_63
Type: CAZyme
Location: 74942 - 78340 (+)
Type: CAZyme
Location: 74942 - 78340 (+)
Gene ID: Rep_857_c_12_64
Type: STP
Location: 78381 - 79409 (+)
Type: STP
Location: 78381 - 79409 (+)
Gene ID: Rep_857_c_12_65
Type: CAZyme
Location: 79437 - 80363 (-)
Type: CAZyme
Location: 79437 - 80363 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Corynebacterium
Species
Corynebacterium jeikeium_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.