Cluster: Rep_857_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_857
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_857_c_78 | Rep_857_c_78_5 | 3724 | 5340 | - | 3.A.1.30.1 |
| TC | Rep_857_c_78 | Rep_857_c_78_6 | 5350 | 5958 | - | 3.A.1.30.1 |
| NULL(UNKNOWN) | Rep_857_c_78 | Rep_857_c_78_7 | 6116 | 8167 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_857_c_78 | Rep_857_c_78_8 | 8256 | 8453 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_857_c_78 | Rep_857_c_78_9 | 8622 | 9965 | - | GH13_20 |
Gene ID: Rep_857_c_78_5
Type: TC
Location: 3724 - 5340 (-)
Type: TC
Location: 3724 - 5340 (-)
Gene ID: Rep_857_c_78_6
Type: TC
Location: 5350 - 5958 (-)
Type: TC
Location: 5350 - 5958 (-)
Gene ID: Rep_857_c_78_7
Type:
Location: 6116 - 8167 (+)
Type:
Location: 6116 - 8167 (+)
Gene ID: Rep_857_c_78_8
Type:
Location: 8256 - 8453 (+)
Type:
Location: 8256 - 8453 (+)
Gene ID: Rep_857_c_78_9
Type: CAZyme
Location: 8622 - 9965 (-)
Type: CAZyme
Location: 8622 - 9965 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Corynebacterium
Species
Corynebacterium jeikeium_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.