Cluster: Rep_857_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_857
- CGC Family ID: CGCFAM_00105
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_857_c_12 | Rep_857_c_12_42 | 50206 | 50988 | + | 3.A.1.103.4 |
| CAZyme | Rep_857_c_12 | Rep_857_c_12_43 | 51156 | 52250 | + | GT2 |
| NULL(UNKNOWN) | Rep_857_c_12 | Rep_857_c_12_44 | 52568 | 53698 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_857_c_12 | Rep_857_c_12_45 | 53854 | 55020 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_857_c_12 | Rep_857_c_12_46 | 55031 | 56953 | - | GT2 |
Gene ID: Rep_857_c_12_42
Type: TC
Location: 50206 - 50988 (+)
Type: TC
Location: 50206 - 50988 (+)
Gene ID: Rep_857_c_12_43
Type: CAZyme
Location: 51156 - 52250 (+)
Type: CAZyme
Location: 51156 - 52250 (+)
Gene ID: Rep_857_c_12_44
Type:
Location: 52568 - 53698 (-)
Type:
Location: 52568 - 53698 (-)
Gene ID: Rep_857_c_12_45
Type:
Location: 53854 - 55020 (-)
Type:
Location: 53854 - 55020 (-)
Gene ID: Rep_857_c_12_46
Type: CAZyme
Location: 55031 - 56953 (-)
Type: CAZyme
Location: 55031 - 56953 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Corynebacterium
Species
Corynebacterium jeikeium_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.