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Cluster: Rep_855_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_855_c_74 Rep_855_c_74_2 332 1882 - 3.B.1.1.5
pfam Rep_855_c_74 Rep_855_c_74_3 1882 6513 - ketoacyl-synt | PP-binding | PP-binding | Abhydrolase_1 | Acyl_transf_1 | Thioesterase | Ketoacyl-synt_C | Abhydrolase_6 | KAsynt_C_assoc | ACP_SdgA_C
sulfatase Rep_855_c_74 Rep_855_c_74_4 6604 8397 - S1_4
CAZyme Rep_855_c_74 Rep_855_c_74_5 8473 9372 - CE5
pfam Rep_855_c_74 Rep_855_c_74_6 9376 9828 - DUF732
CAZyme Rep_855_c_74 Rep_855_c_74_7 9832 11718 - CE1
pfam Rep_855_c_74 Rep_855_c_74_8 11889 12107 + DUF2283
CAZyme Rep_855_c_74 Rep_855_c_74_9 12673 13668 - CE1
CAZyme Rep_855_c_74 Rep_855_c_74_10 13730 15541 - GT89
pfam Rep_855_c_74 Rep_855_c_74_11 15547 16548 - UbiA
pfam Rep_855_c_74 Rep_855_c_74_12 16532 17083 - PAP2
CAZyme Rep_855_c_74 Rep_855_c_74_13 17073 18971 - GT2
Gene ID: Rep_855_c_74_2
Type: TC
Location: 332 - 1882 (-)
Gene ID: Rep_855_c_74_3
Type: pfam
Location: 1882 - 6513 (-)
Gene ID: Rep_855_c_74_4
Type: sulfatase
Location: 6604 - 8397 (-)
Gene ID: Rep_855_c_74_5
Type: CAZyme
Location: 8473 - 9372 (-)
Gene ID: Rep_855_c_74_6
Type: pfam
Location: 9376 - 9828 (-)
Gene ID: Rep_855_c_74_7
Type: CAZyme
Location: 9832 - 11718 (-)
Gene ID: Rep_855_c_74_8
Type: pfam
Location: 11889 - 12107 (+)
Gene ID: Rep_855_c_74_9
Type: CAZyme
Location: 12673 - 13668 (-)
Gene ID: Rep_855_c_74_10
Type: CAZyme
Location: 13730 - 15541 (-)
Gene ID: Rep_855_c_74_11
Type: pfam
Location: 15547 - 16548 (-)
Gene ID: Rep_855_c_74_12
Type: pfam
Location: 16532 - 17083 (-)
Gene ID: Rep_855_c_74_13
Type: CAZyme
Location: 17073 - 18971 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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