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Cluster: Rep_855_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_855_c_32 Rep_855_c_32_44 55450 56532 - GT4
peptidase Rep_855_c_32 Rep_855_c_32_45 56536 57510 - C40.007
peptidase Rep_855_c_32 Rep_855_c_32_46 57961 58671 - C40.007
TC Rep_855_c_32 Rep_855_c_32_47 59533 61176 - 3.D.3.4.1
pfam Rep_855_c_32 Rep_855_c_32_48 61173 62384 - Rieske | QcrA_N
pfam Rep_855_c_32 Rep_855_c_32_49 62381 63265 - Cytochrom_C | Cytochrom_C | Cytochrome_CBB3 | Cytochrome_CBB3
TC Rep_855_c_32 Rep_855_c_32_50 63364 63984 - 3.D.4.4.2
TC Rep_855_c_32 Rep_855_c_32_51 64489 64920 - 3.D.4.4.2
TC Rep_855_c_32 Rep_855_c_32_52 64939 66081 - 3.D.4.4.2
Gene ID: Rep_855_c_32_44
Type: CAZyme
Location: 55450 - 56532 (-)
Gene ID: Rep_855_c_32_45
Type: peptidase
Location: 56536 - 57510 (-)
Gene ID: Rep_855_c_32_46
Type: peptidase
Location: 57961 - 58671 (-)
Gene ID: Rep_855_c_32_47
Type: TC
Location: 59533 - 61176 (-)
Gene ID: Rep_855_c_32_48
Type: pfam
Location: 61173 - 62384 (-)
Gene ID: Rep_855_c_32_49
Type: pfam
Location: 62381 - 63265 (-)
Gene ID: Rep_855_c_32_50
Type: TC
Location: 63364 - 63984 (-)
Gene ID: Rep_855_c_32_51
Type: TC
Location: 64489 - 64920 (-)
Gene ID: Rep_855_c_32_52
Type: TC
Location: 64939 - 66081 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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