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Cluster: Rep_850_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_850_c_1 Rep_850_c_1_30 42738 44492 - 3.A.1.119.1
TC Rep_850_c_1 Rep_850_c_1_31 44489 46159 - 3.A.1.119.1
NULL(UNKNOWN) Rep_850_c_1 Rep_850_c_1_32 46156 48414 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_850_c_1 Rep_850_c_1_33 48495 50570 - GT2
TC Rep_850_c_1 Rep_850_c_1_34 50635 52029 - 3.A.1.103.5
NULL(UNKNOWN) Rep_850_c_1 Rep_850_c_1_35 52029 52877 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_850_c_1 Rep_850_c_1_36 52967 54838 - GT2
CAZyme Rep_850_c_1 Rep_850_c_1_37 54919 57846 - CBM13 | CBM13 | CBM13 | GH25
NULL(UNKNOWN) Rep_850_c_1 Rep_850_c_1_38 58431 60320 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_850_c_1 Rep_850_c_1_39 60460 62088 + 2.A.3.1.3
pfam Rep_850_c_1 Rep_850_c_1_40 62064 62594 - FMN_bind
TC Rep_850_c_1 Rep_850_c_1_41 62575 63471 - 3.A.1.122.8
TC Rep_850_c_1 Rep_850_c_1_42 63464 64768 - 3.A.1.122.8
TC Rep_850_c_1 Rep_850_c_1_43 64781 66097 - 3.A.1.122.8
pfam Rep_850_c_1 Rep_850_c_1_44 66115 67488 - FtrD-like
TC Rep_850_c_1 Rep_850_c_1_45 67531 68166 - 2.A.108.2.10
TC Rep_850_c_1 Rep_850_c_1_46 68206 70128 - 2.A.108.2.11
pfam Rep_850_c_1 Rep_850_c_1_47 70336 71580 + ApbE
TC Rep_850_c_1 Rep_850_c_1_48 71609 73117 - 2.A.3.1.20
TC Rep_850_c_1 Rep_850_c_1_49 73619 75217 - 2.A.1.2.93
CAZyme Rep_850_c_1 Rep_850_c_1_50 75255 76763 - GH13_18
Gene ID: Rep_850_c_1_30
Type: TC
Location: 42738 - 44492 (-)
Gene ID: Rep_850_c_1_31
Type: TC
Location: 44489 - 46159 (-)
Gene ID: Rep_850_c_1_32
Type:
Location: 46156 - 48414 (-)
Gene ID: Rep_850_c_1_33
Type: CAZyme
Location: 48495 - 50570 (-)
Gene ID: Rep_850_c_1_34
Type: TC
Location: 50635 - 52029 (-)
Gene ID: Rep_850_c_1_35
Type:
Location: 52029 - 52877 (-)
Gene ID: Rep_850_c_1_36
Type: CAZyme
Location: 52967 - 54838 (-)
Gene ID: Rep_850_c_1_37
Type: CAZyme
Location: 54919 - 57846 (-)
Gene ID: Rep_850_c_1_38
Type:
Location: 58431 - 60320 (+)
Gene ID: Rep_850_c_1_39
Type: TC
Location: 60460 - 62088 (+)
Gene ID: Rep_850_c_1_40
Type: pfam
Location: 62064 - 62594 (-)
Gene ID: Rep_850_c_1_41
Type: TC
Location: 62575 - 63471 (-)
Gene ID: Rep_850_c_1_42
Type: TC
Location: 63464 - 64768 (-)
Gene ID: Rep_850_c_1_43
Type: TC
Location: 64781 - 66097 (-)
Gene ID: Rep_850_c_1_44
Type: pfam
Location: 66115 - 67488 (-)
Gene ID: Rep_850_c_1_45
Type: TC
Location: 67531 - 68166 (-)
Gene ID: Rep_850_c_1_46
Type: TC
Location: 68206 - 70128 (-)
Gene ID: Rep_850_c_1_47
Type: pfam
Location: 70336 - 71580 (+)
Gene ID: Rep_850_c_1_48
Type: TC
Location: 71609 - 73117 (-)
Gene ID: Rep_850_c_1_49
Type: TC
Location: 73619 - 75217 (-)
Gene ID: Rep_850_c_1_50
Type: CAZyme
Location: 75255 - 76763 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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