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Cluster: Rep_850_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_850_c_0 Rep_850_c_0_247 292945 293757 - 3.A.1.5.27
TC Rep_850_c_0 Rep_850_c_0_248 293757 294647 - 3.A.1.5.26
TC Rep_850_c_0 Rep_850_c_0_249 294644 295600 - 3.A.1.5.42
TC Rep_850_c_0 Rep_850_c_0_250 295604 296578 - 3.A.1.5.32
TC Rep_850_c_0 Rep_850_c_0_251 296614 298257 - 3.A.1.5.28
pfam Rep_850_c_0 Rep_850_c_0_252 298536 298991 - DUF4854
CAZyme Rep_850_c_0 Rep_850_c_0_253 299393 300622 + GT4
Gene ID: Rep_850_c_0_247
Type: TC
Location: 292945 - 293757 (-)
Gene ID: Rep_850_c_0_248
Type: TC
Location: 293757 - 294647 (-)
Gene ID: Rep_850_c_0_249
Type: TC
Location: 294644 - 295600 (-)
Gene ID: Rep_850_c_0_250
Type: TC
Location: 295604 - 296578 (-)
Gene ID: Rep_850_c_0_251
Type: TC
Location: 296614 - 298257 (-)
Gene ID: Rep_850_c_0_252
Type: pfam
Location: 298536 - 298991 (-)
Gene ID: Rep_850_c_0_253
Type: CAZyme
Location: 299393 - 300622 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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