dbCAN Logo

Cluster: Rep_850_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_850_c_2 Rep_850_c_2_38 37102 38868 - GH13_44
STP Rep_850_c_2 Rep_850_c_2_39 39133 40359 + SBP_bac_1
TC Rep_850_c_2 Rep_850_c_2_40 40481 41887 + 3.A.1.1.27
TC Rep_850_c_2 Rep_850_c_2_41 41884 42798 + 3.A.1.1.27
pfam Rep_850_c_2 Rep_850_c_2_42 42928 43863 + Hydrolase | Hydrolase_like | HAD_2
NULL(UNKNOWN) Rep_850_c_2 Rep_850_c_2_43 43916 44677 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_850_c_2 Rep_850_c_2_44 44794 45648 + 3.A.1.1.45
TC Rep_850_c_2 Rep_850_c_2_45 45645 46514 + 3.A.1.1.45
TC Rep_850_c_2 Rep_850_c_2_46 46714 48042 + 3.A.1.1.45
TC Rep_850_c_2 Rep_850_c_2_47 48186 48824 + 9.B.28.1.3
pfam Rep_850_c_2 Rep_850_c_2_48 48891 49589 + Sua5_yciO_yrdC
TC Rep_850_c_2 Rep_850_c_2_49 49628 50974 + 9.B.146.1.7
NULL(UNKNOWN) Rep_850_c_2 Rep_850_c_2_50 50958 51509 + NULL(UNKNOWN)
[View Structural Homologs]
STP Rep_850_c_2 Rep_850_c_2_51 51604 53154 + CBS | CBS
TC Rep_850_c_2 Rep_850_c_2_52 53264 53797 - 3.D.1.8.1
CAZyme Rep_850_c_2 Rep_850_c_2_53 53823 55589 - GH13_30
Gene ID: Rep_850_c_2_38
Type: CAZyme
Location: 37102 - 38868 (-)
Gene ID: Rep_850_c_2_39
Type: STP
Location: 39133 - 40359 (+)
Gene ID: Rep_850_c_2_40
Type: TC
Location: 40481 - 41887 (+)
Gene ID: Rep_850_c_2_41
Type: TC
Location: 41884 - 42798 (+)
Gene ID: Rep_850_c_2_42
Type: pfam
Location: 42928 - 43863 (+)
Gene ID: Rep_850_c_2_43
Type:
Location: 43916 - 44677 (+)
Gene ID: Rep_850_c_2_44
Type: TC
Location: 44794 - 45648 (+)
Gene ID: Rep_850_c_2_45
Type: TC
Location: 45645 - 46514 (+)
Gene ID: Rep_850_c_2_46
Type: TC
Location: 46714 - 48042 (+)
Gene ID: Rep_850_c_2_47
Type: TC
Location: 48186 - 48824 (+)
Gene ID: Rep_850_c_2_48
Type: pfam
Location: 48891 - 49589 (+)
Gene ID: Rep_850_c_2_49
Type: TC
Location: 49628 - 50974 (+)
Gene ID: Rep_850_c_2_50
Type:
Location: 50958 - 51509 (+)
Gene ID: Rep_850_c_2_51
Type: STP
Location: 51604 - 53154 (+)
Gene ID: Rep_850_c_2_52
Type: TC
Location: 53264 - 53797 (-)
Gene ID: Rep_850_c_2_53
Type: CAZyme
Location: 53823 - 55589 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List