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Cluster: Rep_84_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_84_c_0 Rep_84_c_0_501 596440 597540 + GT4
pfam Rep_84_c_0 Rep_84_c_0_502 597543 598955 + O-ag_pol_Wzy
CAZyme Rep_84_c_0 Rep_84_c_0_503 598970 600142 + GT4
CAZyme Rep_84_c_0 Rep_84_c_0_504 600142 601254 + GT4
TC Rep_84_c_0 Rep_84_c_0_505 601259 601867 + 9.B.18.1.2
pfam Rep_84_c_0 Rep_84_c_0_506 601875 602459 + Hexapep | PglD_N
STP Rep_84_c_0 Rep_84_c_0_507 602547 603683 + Aminotran_1_2
TC Rep_84_c_0 Rep_84_c_0_508 604237 606444 - 2.A.16.2.2
Gene ID: Rep_84_c_0_501
Type: CAZyme
Location: 596440 - 597540 (+)
Gene ID: Rep_84_c_0_502
Type: pfam
Location: 597543 - 598955 (+)
Gene ID: Rep_84_c_0_503
Type: CAZyme
Location: 598970 - 600142 (+)
Gene ID: Rep_84_c_0_504
Type: CAZyme
Location: 600142 - 601254 (+)
Gene ID: Rep_84_c_0_505
Type: TC
Location: 601259 - 601867 (+)
Gene ID: Rep_84_c_0_506
Type: pfam
Location: 601875 - 602459 (+)
Gene ID: Rep_84_c_0_507
Type: STP
Location: 602547 - 603683 (+)
Gene ID: Rep_84_c_0_508
Type: TC
Location: 604237 - 606444 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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