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Cluster: Rep_84_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_84_c_0 Rep_84_c_0_427 506551 508206 - 3.B.1.1.2
pfam Rep_84_c_0 Rep_84_c_0_428 508218 508646 - Biotin_lipoyl
NULL(UNKNOWN) Rep_84_c_0 Rep_84_c_0_429 508701 509066 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_84_c_0 Rep_84_c_0_430 509078 510640 - 3.B.1.1.2
STP Rep_84_c_0 Rep_84_c_0_431 510747 511151 - Glyoxalase
NULL(UNKNOWN) Rep_84_c_0 Rep_84_c_0_432 511488 511922 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_84_c_0 Rep_84_c_0_433 512029 512484 + GH29
CAZyme Rep_84_c_0 Rep_84_c_0_434 512442 514118 + GH29
Gene ID: Rep_84_c_0_427
Type: TC
Location: 506551 - 508206 (-)
Gene ID: Rep_84_c_0_428
Type: pfam
Location: 508218 - 508646 (-)
Gene ID: Rep_84_c_0_429
Type:
Location: 508701 - 509066 (-)
Gene ID: Rep_84_c_0_430
Type: TC
Location: 509078 - 510640 (-)
Gene ID: Rep_84_c_0_431
Type: STP
Location: 510747 - 511151 (-)
Gene ID: Rep_84_c_0_432
Type:
Location: 511488 - 511922 (+)
Gene ID: Rep_84_c_0_433
Type: CAZyme
Location: 512029 - 512484 (+)
Gene ID: Rep_84_c_0_434
Type: CAZyme
Location: 512442 - 514118 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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