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Cluster: Rep_84_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_84_c_0 Rep_84_c_0_337 399122 401236 + GH2
CAZyme Rep_84_c_0 Rep_84_c_0_338 401251 402660 + GH29
CAZyme Rep_84_c_0 Rep_84_c_0_339 402682 403797 + GH105
peptidase Rep_84_c_0 Rep_84_c_0_340 403889 405199 - M38.UNW
CAZyme Rep_84_c_0 Rep_84_c_0_341 405401 406939 - GH84
CAZyme Rep_84_c_0 Rep_84_c_0_342 406970 407923 - GH84
sulfatase Rep_84_c_0 Rep_84_c_0_343 408116 409747 - S1_6
TC Rep_84_c_0 Rep_84_c_0_344 409950 411905 + 3.A.1.121.4
pfam Rep_84_c_0 Rep_84_c_0_345 411944 412744 + SpoU_methylase | SpoU_sub_bind
TC Rep_84_c_0 Rep_84_c_0_346 412990 415569 - 1.B.42.1.8
Gene ID: Rep_84_c_0_337
Type: CAZyme
Location: 399122 - 401236 (+)
Gene ID: Rep_84_c_0_338
Type: CAZyme
Location: 401251 - 402660 (+)
Gene ID: Rep_84_c_0_339
Type: CAZyme
Location: 402682 - 403797 (+)
Gene ID: Rep_84_c_0_340
Type: peptidase
Location: 403889 - 405199 (-)
Gene ID: Rep_84_c_0_341
Type: CAZyme
Location: 405401 - 406939 (-)
Gene ID: Rep_84_c_0_342
Type: CAZyme
Location: 406970 - 407923 (-)
Gene ID: Rep_84_c_0_343
Type: sulfatase
Location: 408116 - 409747 (-)
Gene ID: Rep_84_c_0_344
Type: TC
Location: 409950 - 411905 (+)
Gene ID: Rep_84_c_0_345
Type: pfam
Location: 411944 - 412744 (+)
Gene ID: Rep_84_c_0_346
Type: TC
Location: 412990 - 415569 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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