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Cluster: Rep_84_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_84_c_1 Rep_84_c_1_235 298264 300399 + GH97
TC Rep_84_c_1 Rep_84_c_1_236 300553 301767 + 2.A.1.36.1
peptidase Rep_84_c_1 Rep_84_c_1_237 301927 304662 + S06.UPW
NULL(UNKNOWN) Rep_84_c_1 Rep_84_c_1_238 304701 305972 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_84_c_1 Rep_84_c_1_239 306089 308368 - GH2
pfam Rep_84_c_1 Rep_84_c_1_240 308859 309137 + Acetyltransf_1 | Acetyltransf_CG
pfam Rep_84_c_1 Rep_84_c_1_241 309230 310126 - LPG_synthase_C
CAZyme Rep_84_c_1 Rep_84_c_1_242 310316 311458 - GT1
Gene ID: Rep_84_c_1_235
Type: CAZyme
Location: 298264 - 300399 (+)
Gene ID: Rep_84_c_1_236
Type: TC
Location: 300553 - 301767 (+)
Gene ID: Rep_84_c_1_237
Type: peptidase
Location: 301927 - 304662 (+)
Gene ID: Rep_84_c_1_238
Type:
Location: 304701 - 305972 (+)
Gene ID: Rep_84_c_1_239
Type: CAZyme
Location: 306089 - 308368 (-)
Gene ID: Rep_84_c_1_240
Type: pfam
Location: 308859 - 309137 (+)
Gene ID: Rep_84_c_1_241
Type: pfam
Location: 309230 - 310126 (-)
Gene ID: Rep_84_c_1_242
Type: CAZyme
Location: 310316 - 311458 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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